This isn't possible, so there shouldn't be any complications.If I bought a bonus batch, then left the interface
When you purchase a 10 + 1 pull, you'll also have the contents added to your inventory after the purchase.
Bonus Relics are also entirely different Relics as far as the server / system / game is concerned, they just have the same model and name as their non bonus siblings.
If you come across anything weird after the transition that you'd like us to look into, please send us an email!